This function loads the CDM Clinical Data tables with data from AmsterdamUMCdb
Details
This function requires a configured config.yaml
file created using
amstel::create_config()
. It will use the connection configuration specified
in the amsterdamumcdb
and cdm
sections to extract, transform and load the
data from AmsterdamUMCdb into the Common Data Model.
This function assumes amstel::create_cdm_tables()
,
amstel::load_vocabulary_tables()
and amstel::load_source_to_concept_map()
have been run successfully.